STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsLCell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. (125 aa)    
Predicted Functional Partners:
rsmH
16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.968
SFD73308.1
Cell division protein DivIC.
  
 
 
 0.865
SFD82596.1
Penicillin-binding protein 2B.
  
 
 0.862
mraZ
MraZ protein; Belongs to the MraZ family.
  
    0.852
SFD93220.1
Putative rRNA methylase.
  
  
 0.787
SFD82579.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 
 0.780
SFD99794.1
IDEAL domain-containing protein.
  
     0.771
SFD39213.1
Spore coat protein Z.
  
     0.764
SFD76783.1
Protein of unknown function.
  
     0.764
SFD37380.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.