Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD50808.1 | SFD52394.1 | SAMN05216238_1029 | SAMN05216238_10267 | Thioredoxin reductase (NADPH). | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.784 |
SFD50808.1 | SFD96383.1 | SAMN05216238_1029 | SAMN05216238_106177 | Thioredoxin reductase (NADPH). | Bacillithiol biosynthesis deacetylase BshB2. | 0.412 |
SFD50808.1 | SFE17969.1 | SAMN05216238_1029 | SAMN05216238_109134 | Thioredoxin reductase (NADPH). | Bacillithiol system protein YtxJ. | 0.770 |
SFD50808.1 | SFE46368.1 | SAMN05216238_1029 | SAMN05216238_11731 | Thioredoxin reductase (NADPH). | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.749 |
SFD50808.1 | bshC | SAMN05216238_1029 | SAMN05216238_104265 | Thioredoxin reductase (NADPH). | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.792 |
SFD52394.1 | SFD50808.1 | SAMN05216238_10267 | SAMN05216238_1029 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Thioredoxin reductase (NADPH). | 0.784 |
SFD52394.1 | SFE17969.1 | SAMN05216238_10267 | SAMN05216238_109134 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol system protein YtxJ. | 0.752 |
SFD52394.1 | SFE46368.1 | SAMN05216238_10267 | SAMN05216238_11731 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.771 |
SFD52394.1 | bshC | SAMN05216238_10267 | SAMN05216238_104265 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.796 |
SFD82596.1 | SFD82672.1 | SAMN05216238_104260 | SAMN05216238_104264 | Penicillin-binding protein 2B. | Hypothetical protein. | 0.470 |
SFD82596.1 | bshC | SAMN05216238_104260 | SAMN05216238_104265 | Penicillin-binding protein 2B. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.577 |
SFD82596.1 | ftsL | SAMN05216238_104260 | SAMN05216238_104261 | Penicillin-binding protein 2B. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.862 |
SFD82596.1 | mraZ | SAMN05216238_104260 | SAMN05216238_104263 | Penicillin-binding protein 2B. | MraZ protein; Belongs to the MraZ family. | 0.846 |
SFD82672.1 | SFD82596.1 | SAMN05216238_104264 | SAMN05216238_104260 | Hypothetical protein. | Penicillin-binding protein 2B. | 0.470 |
SFD82672.1 | SFD82707.1 | SAMN05216238_104264 | SAMN05216238_104266 | Hypothetical protein. | Protein of unknown function. | 0.515 |
SFD82672.1 | bshC | SAMN05216238_104264 | SAMN05216238_104265 | Hypothetical protein. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.773 |
SFD82672.1 | ftsL | SAMN05216238_104264 | SAMN05216238_104261 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.491 |
SFD82672.1 | mraZ | SAMN05216238_104264 | SAMN05216238_104263 | Hypothetical protein. | MraZ protein; Belongs to the MraZ family. | 0.586 |
SFD82707.1 | SFD82672.1 | SAMN05216238_104266 | SAMN05216238_104264 | Protein of unknown function. | Hypothetical protein. | 0.515 |
SFD82707.1 | bshC | SAMN05216238_104266 | SAMN05216238_104265 | Protein of unknown function. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.572 |
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