node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD54763.1 | SFE35457.1 | SAMN05216238_102162 | SAMN05216238_11376 | ATP-dependent RNA helicase CshB. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.594 |
SFD54763.1 | pnp | SAMN05216238_102162 | SAMN05216238_104119 | ATP-dependent RNA helicase CshB. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.953 |
SFD54763.1 | rny | SAMN05216238_102162 | SAMN05216238_10493 | ATP-dependent RNA helicase CshB. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.717 |
SFD72572.1 | rny | SAMN05216238_103308 | SAMN05216238_10493 | Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development). | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.876 |
SFD78998.1 | rny | SAMN05216238_10492 | SAMN05216238_10493 | Hypothetical protein. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.728 |
SFE35457.1 | SFD54763.1 | SAMN05216238_11376 | SAMN05216238_102162 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase CshB. | 0.594 |
SFE35457.1 | pnp | SAMN05216238_11376 | SAMN05216238_104119 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.956 |
SFE35457.1 | rny | SAMN05216238_11376 | SAMN05216238_10493 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.752 |
cca | pnp | SAMN05216238_11732 | SAMN05216238_104119 | tRNA nucleotidyltransferase (CCA-adding enzyme); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.744 |
cca | rny | SAMN05216238_11732 | SAMN05216238_10493 | tRNA nucleotidyltransferase (CCA-adding enzyme); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.747 |
pfkA | pfp | SAMN05216238_102383 | SAMN05216238_11437 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.934 |
pfkA | rny | SAMN05216238_102383 | SAMN05216238_10493 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.735 |
pfp | pfkA | SAMN05216238_11437 | SAMN05216238_102383 | 6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.934 |
pfp | rny | SAMN05216238_11437 | SAMN05216238_10493 | 6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.735 |
pnp | SFD54763.1 | SAMN05216238_104119 | SAMN05216238_102162 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | ATP-dependent RNA helicase CshB. | 0.953 |
pnp | SFE35457.1 | SAMN05216238_104119 | SAMN05216238_11376 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.956 |
pnp | cca | SAMN05216238_104119 | SAMN05216238_11732 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | tRNA nucleotidyltransferase (CCA-adding enzyme); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.744 |
pnp | rnj | SAMN05216238_104119 | SAMN05216238_104319 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | RNase J1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | 0.523 |
pnp | rny | SAMN05216238_104119 | SAMN05216238_10493 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.827 |
ribBA | rny | SAMN05216238_11230 | SAMN05216238_10493 | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.925 |