Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD67183.1 | SFD67232.1 | SAMN05216238_10384 | SAMN05216238_10387 | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | Sugar transferase EpsL. | 0.933 |
SFD67183.1 | SFD96251.1 | SAMN05216238_10384 | SAMN05216238_106170 | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | Acetyltransferase (isoleucine patch superfamily). | 0.596 |
SFD67183.1 | SFD96267.1 | SAMN05216238_10384 | SAMN05216238_106171 | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | Pyrophosphatase PpaX. | 0.414 |
SFD67232.1 | SFD67183.1 | SAMN05216238_10387 | SAMN05216238_10384 | Sugar transferase EpsL. | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | 0.933 |
SFD67232.1 | SFD96251.1 | SAMN05216238_10387 | SAMN05216238_106170 | Sugar transferase EpsL. | Acetyltransferase (isoleucine patch superfamily). | 0.789 |
SFD67232.1 | SFE16530.1 | SAMN05216238_10387 | SAMN05216238_10975 | Sugar transferase EpsL. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.867 |
SFD67232.1 | SFE22167.1 | SAMN05216238_10387 | SAMN05216238_11074 | Sugar transferase EpsL. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.853 |
SFD96251.1 | SFD67183.1 | SAMN05216238_106170 | SAMN05216238_10384 | Acetyltransferase (isoleucine patch superfamily). | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | 0.596 |
SFD96251.1 | SFD67232.1 | SAMN05216238_106170 | SAMN05216238_10387 | Acetyltransferase (isoleucine patch superfamily). | Sugar transferase EpsL. | 0.789 |
SFD96251.1 | SFD96267.1 | SAMN05216238_106170 | SAMN05216238_106171 | Acetyltransferase (isoleucine patch superfamily). | Pyrophosphatase PpaX. | 0.924 |
SFD96251.1 | SFD96287.1 | SAMN05216238_106170 | SAMN05216238_106172 | Acetyltransferase (isoleucine patch superfamily). | Nucleoside recognition. | 0.816 |
SFD96251.1 | SFE16530.1 | SAMN05216238_106170 | SAMN05216238_10975 | Acetyltransferase (isoleucine patch superfamily). | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.596 |
SFD96251.1 | SFE22167.1 | SAMN05216238_106170 | SAMN05216238_11074 | Acetyltransferase (isoleucine patch superfamily). | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.596 |
SFD96251.1 | SFE46089.1 | SAMN05216238_106170 | SAMN05216238_11724 | Acetyltransferase (isoleucine patch superfamily). | Uncharacterized membrane protein YpjA. | 0.723 |
SFD96251.1 | hprK | SAMN05216238_106170 | SAMN05216238_106174 | Acetyltransferase (isoleucine patch superfamily). | Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...] | 0.731 |
SFD96251.1 | lgt | SAMN05216238_106170 | SAMN05216238_106173 | Acetyltransferase (isoleucine patch superfamily). | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.759 |
SFD96251.1 | pcrB | SAMN05216238_106170 | SAMN05216238_11183 | Acetyltransferase (isoleucine patch superfamily). | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.763 |
SFD96267.1 | SFD67183.1 | SAMN05216238_106171 | SAMN05216238_10384 | Pyrophosphatase PpaX. | Pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. | 0.414 |
SFD96267.1 | SFD96251.1 | SAMN05216238_106171 | SAMN05216238_106170 | Pyrophosphatase PpaX. | Acetyltransferase (isoleucine patch superfamily). | 0.924 |
SFD96267.1 | SFD96287.1 | SAMN05216238_106171 | SAMN05216238_106172 | Pyrophosphatase PpaX. | Nucleoside recognition. | 0.840 |
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