Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD41007.1 | SFD41649.1 | SAMN05216238_101213 | SAMN05216238_101241 | N-acetylmuramoyl-L-alanine amidase. | Putative peptidoglycan binding domain-containing protein. | 0.904 |
SFD41007.1 | SFD86211.1 | SAMN05216238_101213 | SAMN05216238_1056 | N-acetylmuramoyl-L-alanine amidase. | Peptidoglycan endopeptidase LytE. | 0.630 |
SFD41007.1 | SFD95348.1 | SAMN05216238_101213 | SAMN05216238_106118 | N-acetylmuramoyl-L-alanine amidase. | N-terminal domain of peptidoglycan hydrolase CwlO-containing protein. | 0.571 |
SFD41007.1 | SFD96662.1 | SAMN05216238_101213 | SAMN05216238_106194 | N-acetylmuramoyl-L-alanine amidase. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.703 |
SFD41007.1 | SFD96677.1 | SAMN05216238_101213 | SAMN05216238_106195 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.466 |
SFD41007.1 | ftsE | SAMN05216238_101213 | SAMN05216238_106196 | N-acetylmuramoyl-L-alanine amidase. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.558 |
SFD41649.1 | SFD41007.1 | SAMN05216238_101241 | SAMN05216238_101213 | Putative peptidoglycan binding domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.904 |
SFD41649.1 | SFD86211.1 | SAMN05216238_101241 | SAMN05216238_1056 | Putative peptidoglycan binding domain-containing protein. | Peptidoglycan endopeptidase LytE. | 0.622 |
SFD41649.1 | SFD95348.1 | SAMN05216238_101241 | SAMN05216238_106118 | Putative peptidoglycan binding domain-containing protein. | N-terminal domain of peptidoglycan hydrolase CwlO-containing protein. | 0.690 |
SFD41649.1 | SFD96662.1 | SAMN05216238_101241 | SAMN05216238_106194 | Putative peptidoglycan binding domain-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.762 |
SFD41649.1 | SFD96677.1 | SAMN05216238_101241 | SAMN05216238_106195 | Putative peptidoglycan binding domain-containing protein. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.484 |
SFD41649.1 | ftsE | SAMN05216238_101241 | SAMN05216238_106196 | Putative peptidoglycan binding domain-containing protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.485 |
SFD57364.1 | SFD96677.1 | SAMN05216238_102252 | SAMN05216238_106195 | single-stranded-DNA-specific exonuclease. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.552 |
SFD57364.1 | ftsE | SAMN05216238_102252 | SAMN05216238_106196 | single-stranded-DNA-specific exonuclease. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.500 |
SFD82240.1 | SFD96677.1 | SAMN05216238_104241 | SAMN05216238_106195 | Cell division initiation protein. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.573 |
SFD82240.1 | ftsE | SAMN05216238_104241 | SAMN05216238_106196 | Cell division initiation protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.415 |
SFD86211.1 | SFD41007.1 | SAMN05216238_1056 | SAMN05216238_101213 | Peptidoglycan endopeptidase LytE. | N-acetylmuramoyl-L-alanine amidase. | 0.630 |
SFD86211.1 | SFD41649.1 | SAMN05216238_1056 | SAMN05216238_101241 | Peptidoglycan endopeptidase LytE. | Putative peptidoglycan binding domain-containing protein. | 0.622 |
SFD86211.1 | SFD95348.1 | SAMN05216238_1056 | SAMN05216238_106118 | Peptidoglycan endopeptidase LytE. | N-terminal domain of peptidoglycan hydrolase CwlO-containing protein. | 0.721 |
SFD86211.1 | SFD96662.1 | SAMN05216238_1056 | SAMN05216238_106194 | Peptidoglycan endopeptidase LytE. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.859 |
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