STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD97188.1Penicillin-binding protein. (675 aa)    
Predicted Functional Partners:
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
 
 0.862
SFD83217.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
 0.782
SFD39091.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
 0.768
SFD82489.1
Spore cortex peptidoglycan biosynthesis regulator SpoVE; Belongs to the SEDS family.
 
 0.753
SFE46658.1
Penicillin-binding protein 1A.
 
 
 0.726
SFD61484.1
Penicillin-binding protein.
 
 
 0.703
SFD37146.1
Penicillin-binding protein 2A.
 
 
 0.695
SFD58155.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.690
SFD41007.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.680
SFE08689.1
Penicillin-binding protein, 1A family.
 
 
0.667
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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