Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD50786.1 | SFD95002.1 | SAMN05216238_1028 | SAMN05216238_10693 | L-asparaginase. | Carbamoyl-phosphate synthase large subunit. | 0.438 |
SFD50786.1 | SFE46533.1 | SAMN05216238_1028 | SAMN05216238_11736 | L-asparaginase. | L-aspartate aminotransferase apoenzyme. | 0.918 |
SFD50786.1 | argG | SAMN05216238_1028 | SAMN05216238_10691 | L-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.916 |
SFD94981.1 | SFD95002.1 | SAMN05216238_10692 | SAMN05216238_10693 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase large subunit. | 0.998 |
SFD94981.1 | argB | SAMN05216238_10692 | SAMN05216238_101370 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.992 |
SFD94981.1 | argC | SAMN05216238_10692 | SAMN05216238_101368 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.968 |
SFD94981.1 | argG | SAMN05216238_10692 | SAMN05216238_10691 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.999 |
SFD94981.1 | argH | SAMN05216238_10692 | SAMN05216238_10690 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.991 |
SFD94981.1 | argJ | SAMN05216238_10692 | SAMN05216238_101369 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.996 |
SFD95002.1 | SFD50786.1 | SAMN05216238_10693 | SAMN05216238_1028 | Carbamoyl-phosphate synthase large subunit. | L-asparaginase. | 0.438 |
SFD95002.1 | SFD94981.1 | SAMN05216238_10693 | SAMN05216238_10692 | Carbamoyl-phosphate synthase large subunit. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.998 |
SFD95002.1 | argB | SAMN05216238_10693 | SAMN05216238_101370 | Carbamoyl-phosphate synthase large subunit. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.797 |
SFD95002.1 | argC | SAMN05216238_10693 | SAMN05216238_101368 | Carbamoyl-phosphate synthase large subunit. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.700 |
SFD95002.1 | argG | SAMN05216238_10693 | SAMN05216238_10691 | Carbamoyl-phosphate synthase large subunit. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.994 |
SFD95002.1 | argH | SAMN05216238_10693 | SAMN05216238_10690 | Carbamoyl-phosphate synthase large subunit. | Argininosuccinate lyase. | 0.924 |
SFD95002.1 | argJ | SAMN05216238_10693 | SAMN05216238_101369 | Carbamoyl-phosphate synthase large subunit. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.721 |
SFD95002.1 | purA | SAMN05216238_10693 | SAMN05216238_103230 | Carbamoyl-phosphate synthase large subunit. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.821 |
SFE46533.1 | SFD50786.1 | SAMN05216238_11736 | SAMN05216238_1028 | L-aspartate aminotransferase apoenzyme. | L-asparaginase. | 0.918 |
SFE46533.1 | argB | SAMN05216238_11736 | SAMN05216238_101370 | L-aspartate aminotransferase apoenzyme. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.442 |
SFE46533.1 | argG | SAMN05216238_11736 | SAMN05216238_10691 | L-aspartate aminotransferase apoenzyme. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.935 |
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