Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD39213.1 | SFD42129.1 | SAMN05216238_101122 | SAMN05216238_101264 | Spore coat protein Z. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.731 |
SFD39213.1 | SFD87417.1 | SAMN05216238_101122 | SAMN05216238_10570 | Spore coat protein Z. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.575 |
SFD39213.1 | SFD87923.1 | SAMN05216238_101122 | SAMN05216238_10598 | Spore coat protein Z. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.685 |
SFD39213.1 | SFD93482.1 | SAMN05216238_101122 | SAMN05216238_10617 | Spore coat protein Z. | Hypothetical protein. | 0.744 |
SFD39213.1 | SFD96793.1 | SAMN05216238_101122 | SAMN05216238_106202 | Spore coat protein Z. | Flagellar protein FliT. | 0.552 |
SFD39213.1 | SFE00416.1 | SAMN05216238_101122 | SAMN05216238_10734 | Spore coat protein Z. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.764 |
SFD39213.1 | SFE11444.1 | SAMN05216238_101122 | SAMN05216238_108148 | Spore coat protein Z. | Protein of unknown function. | 0.598 |
SFD42129.1 | SFD39213.1 | SAMN05216238_101264 | SAMN05216238_101122 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Spore coat protein Z. | 0.731 |
SFD42129.1 | SFD65965.1 | SAMN05216238_101264 | SAMN05216238_10330 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | YvrJ protein family protein. | 0.632 |
SFD42129.1 | SFD65986.1 | SAMN05216238_101264 | SAMN05216238_10331 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Protein of unknown function. | 0.579 |
SFD42129.1 | SFD93482.1 | SAMN05216238_101264 | SAMN05216238_10617 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.704 |
SFD42129.1 | SFD96793.1 | SAMN05216238_101264 | SAMN05216238_106202 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Flagellar protein FliT. | 0.688 |
SFD42129.1 | SFE00416.1 | SAMN05216238_101264 | SAMN05216238_10734 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.536 |
SFD42129.1 | SFE11444.1 | SAMN05216238_101264 | SAMN05216238_108148 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Protein of unknown function. | 0.703 |
SFD42129.1 | SFE11468.1 | SAMN05216238_101264 | SAMN05216238_108149 | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Protein of unknown function. | 0.529 |
SFD65965.1 | SFD42129.1 | SAMN05216238_10330 | SAMN05216238_101264 | YvrJ protein family protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.632 |
SFD65965.1 | SFD65986.1 | SAMN05216238_10330 | SAMN05216238_10331 | YvrJ protein family protein. | Protein of unknown function. | 0.835 |
SFD65965.1 | SFD87417.1 | SAMN05216238_10330 | SAMN05216238_10570 | YvrJ protein family protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.597 |
SFD65965.1 | SFD87923.1 | SAMN05216238_10330 | SAMN05216238_10598 | YvrJ protein family protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.669 |
SFD65965.1 | SFD96793.1 | SAMN05216238_10330 | SAMN05216238_106202 | YvrJ protein family protein. | Flagellar protein FliT. | 0.730 |
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