Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE11829.1 | SFE11853.1 | SAMN05216238_108163 | SAMN05216238_108164 | PTS system IIC component, Gat family. | L-iditol 2-dehydrogenase. | 0.922 |
SFE11829.1 | SFE11905.1 | SAMN05216238_108163 | SAMN05216238_108166 | PTS system IIC component, Gat family. | Hypothetical protein. | 0.433 |
SFE11829.1 | SFE11937.1 | SAMN05216238_108163 | SAMN05216238_108167 | PTS system IIC component, Gat family. | L-iditol 2-dehydrogenase. | 0.888 |
SFE11829.1 | SFE11959.1 | SAMN05216238_108163 | SAMN05216238_108168 | PTS system IIC component, Gat family. | DNA-binding transcriptional regulator LsrR, DeoR family. | 0.518 |
SFE11829.1 | deoC-2 | SAMN05216238_108163 | SAMN05216238_108165 | PTS system IIC component, Gat family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.544 |
SFE11853.1 | SFE11829.1 | SAMN05216238_108164 | SAMN05216238_108163 | L-iditol 2-dehydrogenase. | PTS system IIC component, Gat family. | 0.922 |
SFE11853.1 | SFE11905.1 | SAMN05216238_108164 | SAMN05216238_108166 | L-iditol 2-dehydrogenase. | Hypothetical protein. | 0.487 |
SFE11853.1 | SFE11937.1 | SAMN05216238_108164 | SAMN05216238_108167 | L-iditol 2-dehydrogenase. | L-iditol 2-dehydrogenase. | 0.955 |
SFE11853.1 | deoC-2 | SAMN05216238_108164 | SAMN05216238_108165 | L-iditol 2-dehydrogenase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.756 |
SFE11905.1 | SFE11829.1 | SAMN05216238_108166 | SAMN05216238_108163 | Hypothetical protein. | PTS system IIC component, Gat family. | 0.433 |
SFE11905.1 | SFE11853.1 | SAMN05216238_108166 | SAMN05216238_108164 | Hypothetical protein. | L-iditol 2-dehydrogenase. | 0.487 |
SFE11905.1 | SFE11937.1 | SAMN05216238_108166 | SAMN05216238_108167 | Hypothetical protein. | L-iditol 2-dehydrogenase. | 0.711 |
SFE11905.1 | SFE11959.1 | SAMN05216238_108166 | SAMN05216238_108168 | Hypothetical protein. | DNA-binding transcriptional regulator LsrR, DeoR family. | 0.420 |
SFE11905.1 | deoC-2 | SAMN05216238_108166 | SAMN05216238_108165 | Hypothetical protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.532 |
SFE11937.1 | SFE11829.1 | SAMN05216238_108167 | SAMN05216238_108163 | L-iditol 2-dehydrogenase. | PTS system IIC component, Gat family. | 0.888 |
SFE11937.1 | SFE11853.1 | SAMN05216238_108167 | SAMN05216238_108164 | L-iditol 2-dehydrogenase. | L-iditol 2-dehydrogenase. | 0.955 |
SFE11937.1 | SFE11905.1 | SAMN05216238_108167 | SAMN05216238_108166 | L-iditol 2-dehydrogenase. | Hypothetical protein. | 0.711 |
SFE11937.1 | SFE11959.1 | SAMN05216238_108167 | SAMN05216238_108168 | L-iditol 2-dehydrogenase. | DNA-binding transcriptional regulator LsrR, DeoR family. | 0.530 |
SFE11937.1 | deoC-2 | SAMN05216238_108167 | SAMN05216238_108165 | L-iditol 2-dehydrogenase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.586 |
SFE11959.1 | SFE11829.1 | SAMN05216238_108168 | SAMN05216238_108163 | DNA-binding transcriptional regulator LsrR, DeoR family. | PTS system IIC component, Gat family. | 0.518 |
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