STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE11959.1DNA-binding transcriptional regulator LsrR, DeoR family. (313 aa)    
Predicted Functional Partners:
SFE12057.1
Glucitol operon activator protein.
 
     0.751
SFE12175.1
Predicted homoserine dehydrogenase, contains C-terminal SAF domain.
 
     0.726
SFE12090.1
PTS system, glucitol/sorbitol-specific IIC component.
 
     0.724
SFE12118.1
PTS system, glucitol/sorbitol-specific IIC component.
 
     0.717
SFE12145.1
PTS system, glucitol/sorbitol-specific IIA component.
 
     0.698
SFE11937.1
L-iditol 2-dehydrogenase.
 
     0.530
SFE11829.1
PTS system IIC component, Gat family.
 
     0.518
SFE11804.1
PTS system IIB component, Gat family.
 
     0.494
SFE11905.1
Hypothetical protein.
       0.420
SFE11753.1
Transcriptional antiterminator.
 
   
 0.419
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.