Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD51311.1 | SFD51659.1 | SAMN05216238_10229 | SAMN05216238_10242 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.652 |
SFD51311.1 | SFD54496.1 | SAMN05216238_10229 | SAMN05216238_102147 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Cell division protein FtsI/penicillin-binding protein 2. | 0.479 |
SFD51311.1 | SFD71659.1 | SAMN05216238_10229 | SAMN05216238_103271 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.934 |
SFD51311.1 | SFD82579.1 | SAMN05216238_10229 | SAMN05216238_104259 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.545 |
SFD51311.1 | SFD82596.1 | SAMN05216238_10229 | SAMN05216238_104260 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Penicillin-binding protein 2B. | 0.916 |
SFD51311.1 | SFE15722.1 | SAMN05216238_10229 | SAMN05216238_10939 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase. | 0.546 |
SFD51659.1 | SFD51311.1 | SAMN05216238_10242 | SAMN05216238_10229 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.652 |
SFD51659.1 | SFD54496.1 | SAMN05216238_10242 | SAMN05216238_102147 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Cell division protein FtsI/penicillin-binding protein 2. | 0.591 |
SFD51659.1 | SFD71659.1 | SAMN05216238_10242 | SAMN05216238_103271 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.591 |
SFD51659.1 | SFD82579.1 | SAMN05216238_10242 | SAMN05216238_104259 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.649 |
SFD51659.1 | SFD82596.1 | SAMN05216238_10242 | SAMN05216238_104260 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Penicillin-binding protein 2B. | 0.903 |
SFD51659.1 | SFD97188.1 | SAMN05216238_10242 | SAMN05216238_106226 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | Penicillin-binding protein. | 0.521 |
SFD51659.1 | SFE15722.1 | SAMN05216238_10242 | SAMN05216238_10939 | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase. | 0.541 |
SFD54496.1 | SFD51311.1 | SAMN05216238_102147 | SAMN05216238_10229 | Cell division protein FtsI/penicillin-binding protein 2. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.479 |
SFD54496.1 | SFD51659.1 | SAMN05216238_102147 | SAMN05216238_10242 | Cell division protein FtsI/penicillin-binding protein 2. | D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.591 |
SFD54496.1 | SFD71659.1 | SAMN05216238_102147 | SAMN05216238_103271 | Cell division protein FtsI/penicillin-binding protein 2. | D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family. | 0.665 |
SFD54496.1 | SFD81725.1 | SAMN05216238_102147 | SAMN05216238_104213 | Cell division protein FtsI/penicillin-binding protein 2. | Serine/threonine protein kinase. | 0.505 |
SFD54496.1 | SFD82579.1 | SAMN05216238_102147 | SAMN05216238_104259 | Cell division protein FtsI/penicillin-binding protein 2. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.928 |
SFD54496.1 | SFD82596.1 | SAMN05216238_102147 | SAMN05216238_104260 | Cell division protein FtsI/penicillin-binding protein 2. | Penicillin-binding protein 2B. | 0.653 |
SFD54496.1 | SFD97188.1 | SAMN05216238_102147 | SAMN05216238_106226 | Cell division protein FtsI/penicillin-binding protein 2. | Penicillin-binding protein. | 0.565 |
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