STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE24100.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (257 aa)    
Predicted Functional Partners:
SFD88583.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
     
 0.871
SFE37700.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
     
 0.871
SFD60492.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.774
SFE43760.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 0.765
SFD89668.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
 0.660
SFE43792.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
 
  0.656
SFD39439.1
2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase.
  
     0.592
SFE24123.1
Glycine betaine/proline transport system substrate-binding protein.
       0.588
SFE11829.1
PTS system IIC component, Gat family.
  
 
  0.586
SFD81446.1
[Acyl-carrier-protein] S-malonyltransferase.
 
 0.576
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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