STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE30950.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
SFE24252.1
General stress protein 26.
   
    0.720
SFE28684.1
Hypothetical protein.
  
    0.629
SFD68930.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
    0.625
SFD94104.1
Hypothetical protein.
   
    0.617
SFE30919.1
YfhE-like protein.
       0.591
SFD65686.1
Hypothetical protein.
   
    0.590
recX
Regulatory protein; Modulates RecA activity; Belongs to the RecX family.
       0.568
SFD38750.1
Acetyltransferase (GNAT) domain-containing protein.
  
    0.507
SFD86369.1
Hypothetical protein.
   
    0.502
zupT
Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
  
    0.446
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.