STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE34520.1Signal transduction histidine kinase. (439 aa)    
Predicted Functional Partners:
SFE34491.1
Two-component system, OmpR family, response regulator CssR.
 0.987
SFE04818.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.961
SFE21239.1
Ribose-binding protein.
    
 0.891
SFD80399.1
Flagellar motor switch protein FliN/FliY.
   
 0.882
ribBA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.876
SFD60492.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.866
SFD60373.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.857
SFE35149.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.838
SFD44981.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.837
SFE07779.1
Two-component system, OmpR family, response regulator ResD.
 0.835
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.