STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE44686.1DNA-binding transcriptional regulator, FadR family. (234 aa)    
Predicted Functional Partners:
SFD90645.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.723
SFE21850.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.720
SFE44716.1
Glycerol 2-dehydrogenase (NAD+).
 
     0.621
SFE12632.1
Transcriptional regulator, GntR family.
  
    0.602
SFE37923.1
GntR family transcriptional regulator.
  
    0.564
SFD87189.1
GntR family transcriptional regulator.
  
    0.554
SFD87579.1
GntR family transcriptional regulator.
  
    0.532
SFD79394.1
Transcriptional regulator, GntR family.
  
    0.496
SFD88710.1
GntR family transcriptional regulator.
  
    0.471
SFD39469.1
P-cumate 2,3-dioxygenase beta subunit.
  
 
 0.428
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.