Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO01164.1 | SDO09878.1 | SAMN05421507_1011041 | SAMN05421507_1011337 | Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. | Salicylate hydroxylase. | 0.890 |
SDO01164.1 | SDP43954.1 | SAMN05421507_1011041 | SAMN05421507_108203 | Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. | Xanthine dehydrogenase YagT iron-sulfur-binding subunit. | 0.904 |
SDO09878.1 | SDO01164.1 | SAMN05421507_1011337 | SAMN05421507_1011041 | Salicylate hydroxylase. | Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. | 0.890 |
SDO09878.1 | SDO14777.1 | SAMN05421507_1011337 | SAMN05421507_1011540 | Salicylate hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.767 |
SDO09878.1 | SDO39382.1 | SAMN05421507_1011337 | SAMN05421507_102389 | Salicylate hydroxylase. | Hypothetical protein. | 0.655 |
SDO09878.1 | SDO41608.1 | SAMN05421507_1011337 | SAMN05421507_102461 | Salicylate hydroxylase. | 3-ketosteroid 9alpha-monooxygenase subunit B. | 0.606 |
SDO09878.1 | SDP37156.1 | SAMN05421507_1011337 | SAMN05421507_107248 | Salicylate hydroxylase. | Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.625 |
SDO09878.1 | SDP43954.1 | SAMN05421507_1011337 | SAMN05421507_108203 | Salicylate hydroxylase. | Xanthine dehydrogenase YagT iron-sulfur-binding subunit. | 0.847 |
SDO09878.1 | SDP56123.1 | SAMN05421507_1011337 | SAMN05421507_110155 | Salicylate hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.745 |
SDO09878.1 | SDP60528.1 | SAMN05421507_1011337 | SAMN05421507_11173 | Salicylate hydroxylase. | Dioxygenase. | 0.619 |
SDO09878.1 | SDP95821.1 | SAMN05421507_1011337 | SAMN05421507_12610 | Salicylate hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.619 |
SDO09878.1 | SDP95888.1 | SAMN05421507_1011337 | SAMN05421507_12632 | Salicylate hydroxylase. | Putative polyketide hydroxylase. | 0.607 |
SDO14777.1 | SDO09878.1 | SAMN05421507_1011540 | SAMN05421507_1011337 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Salicylate hydroxylase. | 0.767 |
SDO14777.1 | SDO39382.1 | SAMN05421507_1011540 | SAMN05421507_102389 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Hypothetical protein. | 0.610 |
SDO14777.1 | SDO41608.1 | SAMN05421507_1011540 | SAMN05421507_102461 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 3-ketosteroid 9alpha-monooxygenase subunit B. | 0.588 |
SDO14777.1 | SDP37156.1 | SAMN05421507_1011540 | SAMN05421507_107248 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.625 |
SDO14777.1 | SDP60528.1 | SAMN05421507_1011540 | SAMN05421507_11173 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Dioxygenase. | 0.402 |
SDO14777.1 | SDP95821.1 | SAMN05421507_1011540 | SAMN05421507_12610 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.429 |
SDO39382.1 | SDO09878.1 | SAMN05421507_102389 | SAMN05421507_1011337 | Hypothetical protein. | Salicylate hydroxylase. | 0.655 |
SDO39382.1 | SDO14777.1 | SAMN05421507_102389 | SAMN05421507_1011540 | Hypothetical protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.610 |
page 1 of 4