STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN70898.1Glutamate transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (272 aa)    
Predicted Functional Partners:
SDP86429.1
Glutamate transport system permease protein.
 
 0.993
SDP86440.1
Glutamate transport system permease protein.
 
 0.971
SDP86409.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.954
SDP91570.1
Polar amino acid transport system permease protein.
 
 0.949
SDP74371.1
Polar amino acid transport system ATP-binding protein.
 
 0.944
SDP91559.1
Polar amino acid transport system ATP-binding protein.
 
 0.944
SDP36748.1
Polar amino acid transport system ATP-binding protein.
 
 0.943
SDP74349.1
Polar amino acid transport system permease protein.
 
 0.932
SDP36723.1
Polar amino acid transport system permease protein.
 
 0.928
SDN88588.1
GAF domain-containing protein.
    
 0.873
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.