STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN84293.1LAO/AO transport system kinase. (330 aa)    
Predicted Functional Partners:
SDN84271.1
methylmalonyl-CoA mutase.
 
 0.996
SDN95118.1
(2R)-ethylmalonyl-CoA mutase.
 
 
 0.987
SDN84247.1
methylmalonyl-CoA mutase.
 
 
 0.971
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
 
0.953
SDN95908.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
  0.874
SDP40396.1
methylmalonyl-CoA mutase, C-terminal domain/methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
  0.820
SDN84977.1
propionyl-CoA carboxylase beta chain.
 
  
  0.707
SDO45780.1
Methylaspartate mutase sigma subunit.
  
 
 0.707
SDO59863.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
  
  0.678
SDP37377.1
propionyl-CoA carboxylase beta chain.
 
  
  0.661
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.