Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN88588.1 | SDN91283.1 | SAMN05421507_101605 | SAMN05421507_101691 | GAF domain-containing protein. | Mechanosensitive ion channel. | 0.417 |
SDN88588.1 | SDN91412.1 | SAMN05421507_101605 | SAMN05421507_101695 | GAF domain-containing protein. | 8-oxo-dGTP diphosphatase. | 0.417 |
SDN88588.1 | gcvP | SAMN05421507_101605 | SAMN05421507_113110 | GAF domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.598 |
SDN91258.1 | SDN91283.1 | SAMN05421507_101690 | SAMN05421507_101691 | Hypothetical protein. | Mechanosensitive ion channel. | 0.487 |
SDN91283.1 | SDN88588.1 | SAMN05421507_101691 | SAMN05421507_101605 | Mechanosensitive ion channel. | GAF domain-containing protein. | 0.417 |
SDN91283.1 | SDN91258.1 | SAMN05421507_101691 | SAMN05421507_101690 | Mechanosensitive ion channel. | Hypothetical protein. | 0.487 |
SDN91283.1 | SDN91318.1 | SAMN05421507_101691 | SAMN05421507_101692 | Mechanosensitive ion channel. | Hypothetical protein. | 0.543 |
SDN91283.1 | SDN91350.1 | SAMN05421507_101691 | SAMN05421507_101693 | Mechanosensitive ion channel. | Hypothetical protein. | 0.543 |
SDN91283.1 | SDN91412.1 | SAMN05421507_101691 | SAMN05421507_101695 | Mechanosensitive ion channel. | 8-oxo-dGTP diphosphatase. | 0.427 |
SDN91283.1 | SDP55323.1 | SAMN05421507_101691 | SAMN05421507_110112 | Mechanosensitive ion channel. | Small conductance mechanosensitive channel. | 0.465 |
SDN91283.1 | gcvP | SAMN05421507_101691 | SAMN05421507_113110 | Mechanosensitive ion channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.594 |
SDN91283.1 | mscL | SAMN05421507_101691 | SAMN05421507_10445 | Mechanosensitive ion channel. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.476 |
SDN91283.1 | purA | SAMN05421507_101691 | SAMN05421507_101694 | Mechanosensitive ion channel. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.545 |
SDN91318.1 | SDN91283.1 | SAMN05421507_101692 | SAMN05421507_101691 | Hypothetical protein. | Mechanosensitive ion channel. | 0.543 |
SDN91318.1 | SDN91350.1 | SAMN05421507_101692 | SAMN05421507_101693 | Hypothetical protein. | Hypothetical protein. | 0.960 |
SDN91318.1 | SDN91412.1 | SAMN05421507_101692 | SAMN05421507_101695 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.921 |
SDN91318.1 | purA | SAMN05421507_101692 | SAMN05421507_101694 | Hypothetical protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.953 |
SDN91350.1 | SDN91283.1 | SAMN05421507_101693 | SAMN05421507_101691 | Hypothetical protein. | Mechanosensitive ion channel. | 0.543 |
SDN91350.1 | SDN91318.1 | SAMN05421507_101693 | SAMN05421507_101692 | Hypothetical protein. | Hypothetical protein. | 0.960 |
SDN91350.1 | SDN91412.1 | SAMN05421507_101693 | SAMN05421507_101695 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.918 |
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