SDN93366.1 protein (Lentzea jiangxiensis) - STRING interaction network

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SDN93366.1

Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. (317 aa)

Predicted Functional Partners:

SDP13797.1

0.638

SDP99152.1

0.619

SDP98774.1

0.589

SDP98484.1

0.573

SDN93397.1

0.555

rbpA

0.466

rpoB

0.450

rpoC

0.450

rpoA

0.450

rpoZ

0.450

Your Current Organism:

Lentzea jiangxiensis

NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDN93366.1	SDN93397.1	SAMN05421507_101759	SAMN05421507_101760	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Uncharacterized conserved protein PhnB, glyoxalase superfamily.	0.555
SDN93366.1	SDP13797.1	SAMN05421507_101759	SAMN05421507_105374	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Proteasome accessory factor C.	0.638
SDN93366.1	SDP98484.1	SAMN05421507_101759	SAMN05421507_14011	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA polymerase-3 subunit epsilon/exodeoxyribonuclease X.	0.573
SDN93366.1	SDP98774.1	SAMN05421507_101759	SAMN05421507_14322	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA polymerase-3 subunit epsilon.	0.589
SDN93366.1	SDP99152.1	SAMN05421507_101759	SAMN05421507_1525	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA polymerase-3 subunit epsilon.	0.619
SDN93366.1	rbpA	SAMN05421507_101759	SAMN05421507_11810	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.466
SDN93366.1	rpoA	SAMN05421507_101759	SAMN05421507_101272	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.450
SDN93366.1	rpoB	SAMN05421507_101759	SAMN05421507_101228	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.450
SDN93366.1	rpoC	SAMN05421507_101759	SAMN05421507_101229	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.450
SDN93366.1	rpoZ	SAMN05421507_101759	SAMN05421507_105254	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.450
SDN93397.1	SDN93366.1	SAMN05421507_101760	SAMN05421507_101759	Uncharacterized conserved protein PhnB, glyoxalase superfamily.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.555
SDP13797.1	SDN93366.1	SAMN05421507_105374	SAMN05421507_101759	Proteasome accessory factor C.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.638
SDP13797.1	SDP98484.1	SAMN05421507_105374	SAMN05421507_14011	Proteasome accessory factor C.	DNA polymerase-3 subunit epsilon/exodeoxyribonuclease X.	0.573
SDP13797.1	SDP98774.1	SAMN05421507_105374	SAMN05421507_14322	Proteasome accessory factor C.	DNA polymerase-3 subunit epsilon.	0.684
SDP13797.1	SDP99152.1	SAMN05421507_105374	SAMN05421507_1525	Proteasome accessory factor C.	DNA polymerase-3 subunit epsilon.	0.619
SDP13797.1	rbpA	SAMN05421507_105374	SAMN05421507_11810	Proteasome accessory factor C.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.900
SDP13797.1	rpoA	SAMN05421507_105374	SAMN05421507_101272	Proteasome accessory factor C.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.876
SDP13797.1	rpoB	SAMN05421507_105374	SAMN05421507_101228	Proteasome accessory factor C.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.883
SDP13797.1	rpoC	SAMN05421507_105374	SAMN05421507_101229	Proteasome accessory factor C.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.876
SDP13797.1	rpoZ	SAMN05421507_105374	SAMN05421507_105254	Proteasome accessory factor C.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.898