STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN96479.1ABC-2 type transport system permease protein. (347 aa)    
Predicted Functional Partners:
SDN96442.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.965
SDP89854.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.694
SDN96512.1
Integral membrane protein.
       0.635
SDP94738.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.572
SDO84366.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.564
SDP20633.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.564
SDN96411.1
Hypothetical protein.
       0.562
SDP68000.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.562
SDP55550.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.557
SDO80523.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.544
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.