STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO32797.1Serine/threonine protein kinase. (372 aa)    
Predicted Functional Partners:
SDP72415.1
FHA domain-containing protein.
  
 
 
 0.892
SDN91959.1
Protein phosphatase.
 
 0.849
SDP77524.1
Protein phosphatase.
 
 0.848
SDN88588.1
GAF domain-containing protein.
  
 0.816
SDP67474.1
Serine/threonine protein phosphatase PrpC.
  
  0.812
SDP94610.1
Signal transduction histidine kinase.
   
 0.791
SDP97595.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.764
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.611
SDP77509.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
 
 
 0.610
SDO65478.1
PAS domain S-box-containing protein.
    
 0.592
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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