Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN88588.1 | SDO28125.1 | SAMN05421507_101605 | SAMN05421507_10219 | GAF domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.810 |
SDN88588.1 | SDO28151.1 | SAMN05421507_101605 | SAMN05421507_10220 | GAF domain-containing protein. | Hypothetical protein. | 0.799 |
SDN88588.1 | SDO37612.1 | SAMN05421507_101605 | SAMN05421507_102332 | GAF domain-containing protein. | Anti-anti-sigma factor. | 0.999 |
SDN88588.1 | SDO65478.1 | SAMN05421507_101605 | SAMN05421507_103255 | GAF domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDN88588.1 | SDO67920.1 | SAMN05421507_101605 | SAMN05421507_103330 | GAF domain-containing protein. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.921 |
SDN88588.1 | SDO68483.1 | SAMN05421507_101605 | SAMN05421507_103347 | GAF domain-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.810 |
SDN88588.1 | SDP03258.1 | SAMN05421507_101605 | SAMN05421507_10519 | GAF domain-containing protein. | Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.921 |
SDN88588.1 | SDP31817.1 | SAMN05421507_101605 | SAMN05421507_10737 | GAF domain-containing protein. | Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.921 |
SDN88588.1 | SDP96051.1 | SAMN05421507_101605 | SAMN05421507_12677 | GAF domain-containing protein. | Hypothetical protein. | 0.921 |
SDN88588.1 | SDP97595.1 | SAMN05421507_101605 | SAMN05421507_1331 | GAF domain-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDO28125.1 | SDN88588.1 | SAMN05421507_10219 | SAMN05421507_101605 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | GAF domain-containing protein. | 0.810 |
SDO28125.1 | SDO28151.1 | SAMN05421507_10219 | SAMN05421507_10220 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.852 |
SDO28125.1 | SDO37612.1 | SAMN05421507_10219 | SAMN05421507_102332 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma factor. | 0.909 |
SDO28125.1 | SDO65478.1 | SAMN05421507_10219 | SAMN05421507_103255 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | PAS domain S-box-containing protein. | 0.708 |
SDO28125.1 | SDO67920.1 | SAMN05421507_10219 | SAMN05421507_103330 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.679 |
SDO28125.1 | SDO68483.1 | SAMN05421507_10219 | SAMN05421507_103347 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Histidine kinase-like ATPase domain-containing protein. | 0.688 |
SDO28125.1 | SDP03258.1 | SAMN05421507_10219 | SAMN05421507_10519 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.665 |
SDO28125.1 | SDP31817.1 | SAMN05421507_10219 | SAMN05421507_10737 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.646 |
SDO28125.1 | SDP96051.1 | SAMN05421507_10219 | SAMN05421507_12677 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.629 |
SDO28125.1 | SDP97595.1 | SAMN05421507_10219 | SAMN05421507_1331 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | DNA-binding transcriptional regulator, LacI/PurR family. | 0.638 |
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