STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO33652.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
SDO33589.1
Winged helix DNA-binding domain-containing protein.
 
     0.807
SDO33618.1
Winged helix DNA-binding domain-containing protein.
 
     0.807
SDO33681.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
       0.547
SDP72147.1
NADPH2:quinone reductase.
 
    0.531
SDP92847.1
NADPH:quinone reductase.
 
    0.518
SDO96611.1
Putative NAD(P)H quinone oxidoreductase, PIG3 family.
 
    0.454
SDO61845.1
Acyl transferase domain-containing protein.
  
 
0.441
SDP41448.1
NADPH:quinone reductase.
 
    0.435
SDP43334.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
    0.427
SDO33563.1
Transcriptional regulator.
  
    0.426
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
Server load: low (14%) [HD]