STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO34494.1Chitin-binding protein. (423 aa)    
Predicted Functional Partners:
SDO34470.1
Cellulose binding domain-containing protein.
 
0.935
SDP35911.1
Chitinase.
 
 
 0.919
SDO34559.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
 
0.911
SDP59434.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.864
SDN83981.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.859
SDP83158.1
Chitinase.
 
 
0.856
SDP14575.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
0.836
SDO34524.1
Hypothetical protein.
       0.786
SDP33391.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.784
SDN91764.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
0.775
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.