Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO39432.1 | SDO39465.1 | SAMN05421507_102391 | SAMN05421507_102392 | Hypothetical protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.576 |
SDO39432.1 | SDO39499.1 | SAMN05421507_102391 | SAMN05421507_102393 | Hypothetical protein. | Putative transmembrane protein (PGPGW). | 0.420 |
SDO39465.1 | SDO39432.1 | SAMN05421507_102392 | SAMN05421507_102391 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Hypothetical protein. | 0.576 |
SDO39465.1 | SDO39499.1 | SAMN05421507_102392 | SAMN05421507_102393 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Putative transmembrane protein (PGPGW). | 0.548 |
SDO39499.1 | SDO39432.1 | SAMN05421507_102393 | SAMN05421507_102391 | Putative transmembrane protein (PGPGW). | Hypothetical protein. | 0.420 |
SDO39499.1 | SDO39465.1 | SAMN05421507_102393 | SAMN05421507_102392 | Putative transmembrane protein (PGPGW). | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.548 |
SDO39499.1 | SDO93381.1 | SAMN05421507_102393 | SAMN05421507_104448 | Putative transmembrane protein (PGPGW). | Anion-transporting ATPase, ArsA/GET3 family. | 0.415 |
SDO39499.1 | SDP46682.1 | SAMN05421507_102393 | SAMN05421507_10916 | Putative transmembrane protein (PGPGW). | Pimeloyl-ACP methyl ester carboxylesterase. | 0.435 |
SDO39499.1 | SDP90083.1 | SAMN05421507_102393 | SAMN05421507_119106 | Putative transmembrane protein (PGPGW). | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | 0.438 |
SDO39499.1 | SDP92894.1 | SAMN05421507_102393 | SAMN05421507_12164 | Putative transmembrane protein (PGPGW). | Sulfoxide reductase heme-binding subunit YedZ. | 0.712 |
SDO39499.1 | SDP93087.1 | SAMN05421507_102393 | SAMN05421507_12197 | Putative transmembrane protein (PGPGW). | Hypothetical protein. | 0.558 |
SDO39499.1 | SDP93448.1 | SAMN05421507_102393 | SAMN05421507_12211 | Putative transmembrane protein (PGPGW). | Hypothetical protein. | 0.496 |
SDO39499.1 | SDP93499.1 | SAMN05421507_102393 | SAMN05421507_12221 | Putative transmembrane protein (PGPGW). | Transcriptional regulatory protein, C terminal. | 0.446 |
SDO39499.1 | SDP98378.1 | SAMN05421507_102393 | SAMN05421507_1391 | Putative transmembrane protein (PGPGW). | Helix-turn-helix domain-containing protein. | 0.456 |
SDO93381.1 | SDO39499.1 | SAMN05421507_104448 | SAMN05421507_102393 | Anion-transporting ATPase, ArsA/GET3 family. | Putative transmembrane protein (PGPGW). | 0.415 |
SDP46682.1 | SDO39499.1 | SAMN05421507_10916 | SAMN05421507_102393 | Pimeloyl-ACP methyl ester carboxylesterase. | Putative transmembrane protein (PGPGW). | 0.435 |
SDP46682.1 | SDP92894.1 | SAMN05421507_10916 | SAMN05421507_12164 | Pimeloyl-ACP methyl ester carboxylesterase. | Sulfoxide reductase heme-binding subunit YedZ. | 0.755 |
SDP90083.1 | SDO39499.1 | SAMN05421507_119106 | SAMN05421507_102393 | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | Putative transmembrane protein (PGPGW). | 0.438 |
SDP90083.1 | SDP92894.1 | SAMN05421507_119106 | SAMN05421507_12164 | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | Sulfoxide reductase heme-binding subunit YedZ. | 0.439 |
SDP90083.1 | SDP93448.1 | SAMN05421507_119106 | SAMN05421507_12211 | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. | Hypothetical protein. | 0.508 |
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