Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN93976.1 | SDO28883.1 | SAMN05421507_101780 | SAMN05421507_10242 | Homoserine dehydrogenase. | Probable phosphoglycerate mutase. | 0.471 |
SDN93976.1 | SDP23295.1 | SAMN05421507_101780 | SAMN05421507_106113 | Homoserine dehydrogenase. | Phosphoserine phosphatase. | 0.939 |
SDN93976.1 | SDP50454.1 | SAMN05421507_101780 | SAMN05421507_109188 | Homoserine dehydrogenase. | Cystathionine beta-synthase. | 0.963 |
SDO28809.1 | SDO28850.1 | SAMN05421507_10240 | SAMN05421507_10241 | Hypothetical protein. | Hypothetical protein. | 0.513 |
SDO28809.1 | SDO28883.1 | SAMN05421507_10240 | SAMN05421507_10242 | Hypothetical protein. | Probable phosphoglycerate mutase. | 0.454 |
SDO28850.1 | SDO28809.1 | SAMN05421507_10241 | SAMN05421507_10240 | Hypothetical protein. | Hypothetical protein. | 0.513 |
SDO28850.1 | SDO28883.1 | SAMN05421507_10241 | SAMN05421507_10242 | Hypothetical protein. | Probable phosphoglycerate mutase. | 0.786 |
SDO28883.1 | SDN93976.1 | SAMN05421507_10242 | SAMN05421507_101780 | Probable phosphoglycerate mutase. | Homoserine dehydrogenase. | 0.471 |
SDO28883.1 | SDO28809.1 | SAMN05421507_10242 | SAMN05421507_10240 | Probable phosphoglycerate mutase. | Hypothetical protein. | 0.454 |
SDO28883.1 | SDO28850.1 | SAMN05421507_10242 | SAMN05421507_10241 | Probable phosphoglycerate mutase. | Hypothetical protein. | 0.786 |
SDO28883.1 | SDP23295.1 | SAMN05421507_10242 | SAMN05421507_106113 | Probable phosphoglycerate mutase. | Phosphoserine phosphatase. | 0.699 |
SDO28883.1 | SDP50454.1 | SAMN05421507_10242 | SAMN05421507_109188 | Probable phosphoglycerate mutase. | Cystathionine beta-synthase. | 0.666 |
SDO28883.1 | SDP96197.1 | SAMN05421507_10242 | SAMN05421507_1277 | Probable phosphoglycerate mutase. | Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.565 |
SDO28883.1 | cobS | SAMN05421507_10242 | SAMN05421507_111230 | Probable phosphoglycerate mutase. | adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.537 |
SDO28883.1 | cobT | SAMN05421507_10242 | SAMN05421507_111231 | Probable phosphoglycerate mutase. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.515 |
SDO28883.1 | gpmA | SAMN05421507_10242 | SAMN05421507_10180 | Probable phosphoglycerate mutase. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.486 |
SDO28883.1 | pfp | SAMN05421507_10242 | SAMN05421507_1433 | Probable phosphoglycerate mutase. | 6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.484 |
SDP23295.1 | SDN93976.1 | SAMN05421507_106113 | SAMN05421507_101780 | Phosphoserine phosphatase. | Homoserine dehydrogenase. | 0.939 |
SDP23295.1 | SDO28883.1 | SAMN05421507_106113 | SAMN05421507_10242 | Phosphoserine phosphatase. | Probable phosphoglycerate mutase. | 0.699 |
SDP23295.1 | SDP50454.1 | SAMN05421507_106113 | SAMN05421507_109188 | Phosphoserine phosphatase. | Cystathionine beta-synthase. | 0.955 |
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