Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN88165.1 | SDO44282.1 | SAMN05421507_101593 | SAMN05421507_102544 | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | 0.541 |
SDO32147.1 | SDO44282.1 | SAMN05421507_102153 | SAMN05421507_102544 | Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | 0.484 |
SDO44242.1 | SDO44282.1 | SAMN05421507_102543 | SAMN05421507_102544 | Hypothetical protein. | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | 0.865 |
SDO44242.1 | SDO44309.1 | SAMN05421507_102543 | SAMN05421507_102545 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.447 |
SDO44282.1 | SDN88165.1 | SAMN05421507_102544 | SAMN05421507_101593 | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.541 |
SDO44282.1 | SDO32147.1 | SAMN05421507_102544 | SAMN05421507_102153 | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.484 |
SDO44282.1 | SDO44242.1 | SAMN05421507_102544 | SAMN05421507_102543 | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | Hypothetical protein. | 0.865 |
SDO44282.1 | SDO44309.1 | SAMN05421507_102544 | SAMN05421507_102545 | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.511 |
SDO44309.1 | SDO44242.1 | SAMN05421507_102545 | SAMN05421507_102543 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.447 |
SDO44309.1 | SDO44282.1 | SAMN05421507_102545 | SAMN05421507_102544 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon. | 0.511 |