STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO62505.1Ferredoxin-NADP reductase. (351 aa)    
Predicted Functional Partners:
SDO62459.1
linoleoyl-CoA desaturase.
 
 0.998
SDP88785.1
Indoleamine 2,3-dioxygenase.
  
 0.972
SDO61612.1
Acyl transferase domain-containing protein.
  
 0.956
SDO61845.1
Acyl transferase domain-containing protein.
  
 0.949
SDO72733.1
Hypothetical protein.
 
 
 0.948
SDP98143.1
Acyl transferase domain-containing protein.
  
 0.946
SDO63234.1
Sarcosine oxidase subunit alpha.
  
 0.944
SDP79634.1
Acyl transferase domain-containing protein.
  
 0.940
SDP79618.1
Type I polyketide synthase PikAI.
  
 0.939
SDO61588.1
Acyl transferase domain-containing protein.
   
 0.934
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.