Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO63966.1 | SDO63989.1 | SAMN05421507_103209 | SAMN05421507_103210 | Transcriptional regulator, contains XRE-family HTH domain. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.613 |
SDO63966.1 | SDP59374.1 | SAMN05421507_103209 | SAMN05421507_1118 | Transcriptional regulator, contains XRE-family HTH domain. | Methyltransferase domain-containing protein. | 0.504 |
SDO63966.1 | SDP73179.1 | SAMN05421507_103209 | SAMN05421507_113151 | Transcriptional regulator, contains XRE-family HTH domain. | Nicotinamide-nucleotide adenylyltransferase, NadR type. | 0.637 |
SDO63966.1 | nadE | SAMN05421507_103209 | SAMN05421507_1288 | Transcriptional regulator, contains XRE-family HTH domain. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.417 |
SDO63989.1 | SDO63966.1 | SAMN05421507_103210 | SAMN05421507_103209 | Pimeloyl-ACP methyl ester carboxylesterase. | Transcriptional regulator, contains XRE-family HTH domain. | 0.613 |
SDP59374.1 | SDO63966.1 | SAMN05421507_1118 | SAMN05421507_103209 | Methyltransferase domain-containing protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.504 |
SDP73179.1 | SDO63966.1 | SAMN05421507_113151 | SAMN05421507_103209 | Nicotinamide-nucleotide adenylyltransferase, NadR type. | Transcriptional regulator, contains XRE-family HTH domain. | 0.637 |
SDP73179.1 | nadE | SAMN05421507_113151 | SAMN05421507_1288 | Nicotinamide-nucleotide adenylyltransferase, NadR type. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.987 |
nadE | SDO63966.1 | SAMN05421507_1288 | SAMN05421507_103209 | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Transcriptional regulator, contains XRE-family HTH domain. | 0.417 |
nadE | SDP73179.1 | SAMN05421507_1288 | SAMN05421507_113151 | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Nicotinamide-nucleotide adenylyltransferase, NadR type. | 0.987 |