STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO71356.1Xaa-Pro aminopeptidase. (476 aa)    
Predicted Functional Partners:
SDP95399.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.876
SDO63234.1
Sarcosine oxidase subunit alpha.
  
 0.786
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.739
SDP95404.1
Sarcosine oxidase.
  
 
  0.679
SDO28413.1
Phytanoyl-CoA dioxygenase (PhyH).
    
 0.673
SDP25255.1
Creatinine amidohydrolase.
    
  0.636
SDP43733.1
Creatinine amidohydrolase.
    
  0.636
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.628
SDP95898.1
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.628
SDO12395.1
Sarcosine oxidase subunit beta.
  
 
  0.613
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.