STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO85496.1Protein of unknown function. (144 aa)    
Predicted Functional Partners:
SDO85463.1
Predicted arabinose efflux permease, MFS family.
  
    0.928
SDP96598.1
Hypothetical protein.
  
     0.770
SDP76994.1
Hypothetical protein.
  
     0.769
SDN83434.1
Hypothetical protein.
  
     0.765
SDP60181.1
Putative sensory transduction regulator.
  
     0.763
SDP97151.1
Hypothetical protein.
  
     0.761
SDO85436.1
Glutaminyl-peptide cyclotransferase.
       0.758
SDP85676.1
Hypothetical protein.
  
     0.758
SDP96615.1
Hypothetical protein.
  
     0.755
SDP76790.1
Protein of unknown function.
  
     0.752
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.