Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO32657.1 | SDO88070.1 | SAMN05421507_102171 | SAMN05421507_104273 | L-rhamnose isomerase / sugar isomerase. | L-rhamnose mutarotase. | 0.916 |
SDO32657.1 | SDO88175.1 | SAMN05421507_102171 | SAMN05421507_104277 | L-rhamnose isomerase / sugar isomerase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.405 |
SDO88024.1 | SDO88044.1 | SAMN05421507_104271 | SAMN05421507_104272 | L-fuconolactonase. | D-threo-aldose 1-dehydrogenase. | 0.995 |
SDO88024.1 | SDO88070.1 | SAMN05421507_104271 | SAMN05421507_104273 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.935 |
SDO88024.1 | SDO88097.1 | SAMN05421507_104271 | SAMN05421507_104274 | L-fuconolactonase. | Simple sugar transport system permease protein/ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.786 |
SDO88024.1 | SDO88125.1 | SAMN05421507_104271 | SAMN05421507_104275 | L-fuconolactonase. | Simple sugar transport system ATP-binding protein. | 0.793 |
SDO88024.1 | SDO88149.1 | SAMN05421507_104271 | SAMN05421507_104276 | L-fuconolactonase. | Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein. | 0.840 |
SDO88024.1 | SDO88175.1 | SAMN05421507_104271 | SAMN05421507_104277 | L-fuconolactonase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.910 |
SDO88024.1 | SDO88202.1 | SAMN05421507_104271 | SAMN05421507_104278 | L-fuconolactonase. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.993 |
SDO88024.1 | SDO88230.1 | SAMN05421507_104271 | SAMN05421507_104279 | L-fuconolactonase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.911 |
SDO88024.1 | SDP66844.1 | SAMN05421507_104271 | SAMN05421507_11287 | L-fuconolactonase. | Fucose permease. | 0.640 |
SDO88044.1 | SDO88024.1 | SAMN05421507_104272 | SAMN05421507_104271 | D-threo-aldose 1-dehydrogenase. | L-fuconolactonase. | 0.995 |
SDO88044.1 | SDO88070.1 | SAMN05421507_104272 | SAMN05421507_104273 | D-threo-aldose 1-dehydrogenase. | L-rhamnose mutarotase. | 0.890 |
SDO88044.1 | SDO88097.1 | SAMN05421507_104272 | SAMN05421507_104274 | D-threo-aldose 1-dehydrogenase. | Simple sugar transport system permease protein/ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.776 |
SDO88044.1 | SDO88125.1 | SAMN05421507_104272 | SAMN05421507_104275 | D-threo-aldose 1-dehydrogenase. | Simple sugar transport system ATP-binding protein. | 0.792 |
SDO88044.1 | SDO88149.1 | SAMN05421507_104272 | SAMN05421507_104276 | D-threo-aldose 1-dehydrogenase. | Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein. | 0.827 |
SDO88044.1 | SDO88175.1 | SAMN05421507_104272 | SAMN05421507_104277 | D-threo-aldose 1-dehydrogenase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.901 |
SDO88044.1 | SDO88202.1 | SAMN05421507_104272 | SAMN05421507_104278 | D-threo-aldose 1-dehydrogenase. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.921 |
SDO88044.1 | SDO88230.1 | SAMN05421507_104272 | SAMN05421507_104279 | D-threo-aldose 1-dehydrogenase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.844 |
SDO88070.1 | SDO32657.1 | SAMN05421507_104273 | SAMN05421507_102171 | L-rhamnose mutarotase. | L-rhamnose isomerase / sugar isomerase. | 0.916 |
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