STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO88253.1Subtilase family protein; Belongs to the peptidase S8 family. (937 aa)    
Predicted Functional Partners:
SDP05198.1
Hypothetical protein.
    
  0.672
SDP32452.1
Conserved repeat domain-containing protein.
  
 
  0.651
SDP06233.1
Serine protease.
  
 
  0.624
SDO88277.1
BadF-type ATPase.
       0.616
SDO43660.1
Hypothetical protein.
    
  0.593
SDO88175.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
    
  0.579
SDO88024.1
L-fuconolactonase.
       0.543
SDO88097.1
Simple sugar transport system permease protein/ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.543
SDO88125.1
Simple sugar transport system ATP-binding protein.
       0.543
SDO88149.1
Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein.
       0.543
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.