Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN88588.1 | SDO65478.1 | SAMN05421507_101605 | SAMN05421507_103255 | GAF domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDN88588.1 | SDP15075.1 | SAMN05421507_101605 | SAMN05421507_105416 | GAF domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.810 |
SDN88588.1 | SDP94610.1 | SAMN05421507_101605 | SAMN05421507_12410 | GAF domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDN88588.1 | SDP97595.1 | SAMN05421507_101605 | SAMN05421507_1331 | GAF domain-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDN88588.1 | gcvP | SAMN05421507_101605 | SAMN05421507_113110 | GAF domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.598 |
SDO65478.1 | SDN88588.1 | SAMN05421507_103255 | SAMN05421507_101605 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.999 |
SDO65478.1 | SDP15075.1 | SAMN05421507_103255 | SAMN05421507_105416 | PAS domain S-box-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.667 |
SDO65478.1 | SDP94610.1 | SAMN05421507_103255 | SAMN05421507_12410 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDO65478.1 | SDP97595.1 | SAMN05421507_103255 | SAMN05421507_1331 | PAS domain S-box-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDO65478.1 | gcvP | SAMN05421507_103255 | SAMN05421507_113110 | PAS domain S-box-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.482 |
SDO65478.1 | rpoB | SAMN05421507_103255 | SAMN05421507_101228 | PAS domain S-box-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.401 |
SDP15075.1 | SDN88588.1 | SAMN05421507_105416 | SAMN05421507_101605 | DNA-binding transcriptional activator of the SARP family. | GAF domain-containing protein. | 0.810 |
SDP15075.1 | SDO65478.1 | SAMN05421507_105416 | SAMN05421507_103255 | DNA-binding transcriptional activator of the SARP family. | PAS domain S-box-containing protein. | 0.667 |
SDP15075.1 | SDP15107.1 | SAMN05421507_105416 | SAMN05421507_105417 | DNA-binding transcriptional activator of the SARP family. | Epoxide hydrolase. | 0.782 |
SDP15075.1 | SDP73179.1 | SAMN05421507_105416 | SAMN05421507_113151 | DNA-binding transcriptional activator of the SARP family. | Nicotinamide-nucleotide adenylyltransferase, NadR type. | 0.788 |
SDP15075.1 | SDP94610.1 | SAMN05421507_105416 | SAMN05421507_12410 | DNA-binding transcriptional activator of the SARP family. | Signal transduction histidine kinase. | 0.870 |
SDP15075.1 | SDP97595.1 | SAMN05421507_105416 | SAMN05421507_1331 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.760 |
SDP15075.1 | alaS | SAMN05421507_105416 | SAMN05421507_105219 | DNA-binding transcriptional activator of the SARP family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.753 |
SDP15075.1 | gcvP | SAMN05421507_105416 | SAMN05421507_113110 | DNA-binding transcriptional activator of the SARP family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.657 |
SDP15075.1 | rpoA | SAMN05421507_105416 | SAMN05421507_101272 | DNA-binding transcriptional activator of the SARP family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.665 |
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