STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP15803.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
rsmA
16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.791
SDP33237.1
Hypothetical protein.
  
     0.750
SDP15775.1
Kanamycin kinase/aminoglycoside 3'-phosphotransferase-2.
       0.734
SDO15238.1
Hypothetical protein.
  
     0.672
SDO82628.1
Hypothetical protein.
  
     0.652
SDP83630.1
PPE family protein.
  
     0.616
SDO04835.1
Hypothetical protein.
  
     0.605
SDP05198.1
Hypothetical protein.
  
     0.597
SDP84033.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
  
     0.581
SDN76616.1
Hypothetical protein.
  
     0.575
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.