STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP04459.1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (867 aa)    
Predicted Functional Partners:
SDN91764.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.769
SDP54097.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.765
SDO35465.1
Fibronectin type III domain-containing protein.
  
  
  0.764
SDO35205.1
Endoglucanase.
  
  
  0.763
SDO34559.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
 
  
  0.762
SDP35911.1
Chitinase.
  
 
 0.734
SDP14575.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
  0.732
SDO34769.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.714
SDP78055.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.698
SDO33027.1
Endo-1,4-beta-xylanase.
 
  
 0.684
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.