STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP05445.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
SDP05418.1
Hypothetical protein.
       0.756
SDP05386.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
       0.746
SDP10898.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
  0.718
SDP70801.1
Hypothetical protein.
  
     0.592
SDP98416.1
Hypothetical protein.
  
     0.592
SDO63515.1
Cholesterol oxidase.
  
     0.512
SDP05350.1
Protein of unknown function.
       0.509
SDP06864.1
TIGR03083 family protein.
  
     0.508
SDO63486.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
  
     0.500
SDP65545.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.