Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO59801.1 | SDP26890.1 | SAMN05421507_10378 | SAMN05421507_106246 | Hypothetical protein. | Protein-disulfide isomerase. | 0.670 |
SDO90401.1 | SDP26890.1 | SAMN05421507_104361 | SAMN05421507_106246 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | Protein-disulfide isomerase. | 0.407 |
SDP26890.1 | SDO59801.1 | SAMN05421507_106246 | SAMN05421507_10378 | Protein-disulfide isomerase. | Hypothetical protein. | 0.670 |
SDP26890.1 | SDO90401.1 | SAMN05421507_106246 | SAMN05421507_104361 | Protein-disulfide isomerase. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.407 |
SDP26890.1 | SDP26918.1 | SAMN05421507_106246 | SAMN05421507_106247 | Protein-disulfide isomerase. | Predicted arabinose efflux permease, MFS family. | 0.641 |
SDP26890.1 | SDP26948.1 | SAMN05421507_106246 | SAMN05421507_106248 | Protein-disulfide isomerase. | Acetyltransferase (GNAT) family protein. | 0.511 |
SDP26890.1 | SDP66754.1 | SAMN05421507_106246 | SAMN05421507_11282 | Protein-disulfide isomerase. | Uncharacterized membrane protein. | 0.528 |
SDP26918.1 | SDP26890.1 | SAMN05421507_106247 | SAMN05421507_106246 | Predicted arabinose efflux permease, MFS family. | Protein-disulfide isomerase. | 0.641 |
SDP26918.1 | SDP26948.1 | SAMN05421507_106247 | SAMN05421507_106248 | Predicted arabinose efflux permease, MFS family. | Acetyltransferase (GNAT) family protein. | 0.623 |
SDP26948.1 | SDP26890.1 | SAMN05421507_106248 | SAMN05421507_106246 | Acetyltransferase (GNAT) family protein. | Protein-disulfide isomerase. | 0.511 |
SDP26948.1 | SDP26918.1 | SAMN05421507_106248 | SAMN05421507_106247 | Acetyltransferase (GNAT) family protein. | Predicted arabinose efflux permease, MFS family. | 0.623 |
SDP66754.1 | SDP26890.1 | SAMN05421507_11282 | SAMN05421507_106246 | Uncharacterized membrane protein. | Protein-disulfide isomerase. | 0.528 |