STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP27882.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SDP42897.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
 
 
 0.856
SDP42048.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
 
 
 0.854
SDP98214.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
 
 
 0.854
SDP98216.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
 
 
 0.852
SDP10898.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.851
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.848
SDO87281.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 
 0.825
SDP93558.1
ATPase family associated with various cellular activities (AAA).
   
 
 0.825
SDP27902.1
Hypothetical protein.
       0.746
SDO29807.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
      0.721
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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