Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN82560.1 | SDO09437.1 | SAMN05421507_101399 | SAMN05421507_1011319 | Ribose-phosphate pyrophosphokinase. | Transketolase. | 0.891 |
SDN82560.1 | SDP10866.1 | SAMN05421507_101399 | SAMN05421507_105268 | Ribose-phosphate pyrophosphokinase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.795 |
SDN82560.1 | SDP33860.1 | SAMN05421507_101399 | SAMN05421507_107112 | Ribose-phosphate pyrophosphokinase. | Ribokinase; Belongs to the carbohydrate kinase PfkB family. | 0.758 |
SDN82560.1 | SDP55025.1 | SAMN05421507_101399 | SAMN05421507_11097 | Ribose-phosphate pyrophosphokinase. | Ribose 5-phosphate isomerase B. | 0.910 |
SDN82560.1 | SDP84437.1 | SAMN05421507_101399 | SAMN05421507_116173 | Ribose-phosphate pyrophosphokinase. | Sugar or nucleoside kinase, ribokinase family; Belongs to the carbohydrate kinase PfkB family. | 0.750 |
SDN82560.1 | SDP96998.1 | SAMN05421507_101399 | SAMN05421507_12946 | Ribose-phosphate pyrophosphokinase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.942 |
SDN82560.1 | prs-2 | SAMN05421507_101399 | SAMN05421507_109249 | Ribose-phosphate pyrophosphokinase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.901 |
SDN82560.1 | rbsK | SAMN05421507_101399 | SAMN05421507_114191 | Ribose-phosphate pyrophosphokinase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.758 |
SDO09437.1 | SDN82560.1 | SAMN05421507_1011319 | SAMN05421507_101399 | Transketolase. | Ribose-phosphate pyrophosphokinase. | 0.891 |
SDO09437.1 | SDP10866.1 | SAMN05421507_1011319 | SAMN05421507_105268 | Transketolase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.932 |
SDO09437.1 | SDP33860.1 | SAMN05421507_1011319 | SAMN05421507_107112 | Transketolase. | Ribokinase; Belongs to the carbohydrate kinase PfkB family. | 0.768 |
SDO09437.1 | SDP55025.1 | SAMN05421507_1011319 | SAMN05421507_11097 | Transketolase. | Ribose 5-phosphate isomerase B. | 0.926 |
SDO09437.1 | SDP84437.1 | SAMN05421507_1011319 | SAMN05421507_116173 | Transketolase. | Sugar or nucleoside kinase, ribokinase family; Belongs to the carbohydrate kinase PfkB family. | 0.723 |
SDO09437.1 | SDP96998.1 | SAMN05421507_1011319 | SAMN05421507_12946 | Transketolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.926 |
SDO09437.1 | prs-2 | SAMN05421507_1011319 | SAMN05421507_109249 | Transketolase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.895 |
SDO09437.1 | rbsK | SAMN05421507_1011319 | SAMN05421507_114191 | Transketolase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.765 |
SDP10866.1 | SDN82560.1 | SAMN05421507_105268 | SAMN05421507_101399 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribose-phosphate pyrophosphokinase. | 0.795 |
SDP10866.1 | SDO09437.1 | SAMN05421507_105268 | SAMN05421507_1011319 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Transketolase. | 0.932 |
SDP10866.1 | SDP33860.1 | SAMN05421507_105268 | SAMN05421507_107112 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribokinase; Belongs to the carbohydrate kinase PfkB family. | 0.759 |
SDP10866.1 | SDP55025.1 | SAMN05421507_105268 | SAMN05421507_11097 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribose 5-phosphate isomerase B. | 0.932 |
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