Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN89353.1 | SDO01189.1 | SAMN05421507_101628 | SAMN05421507_1011042 | N-carbamoyl-L-amino-acid hydrolase. | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 0.568 |
SDN89353.1 | SDO01215.1 | SAMN05421507_101628 | SAMN05421507_1011043 | N-carbamoyl-L-amino-acid hydrolase. | Allantoinase. | 0.949 |
SDN89353.1 | SDP34964.1 | SAMN05421507_101628 | SAMN05421507_107156 | N-carbamoyl-L-amino-acid hydrolase. | Polysaccharide deacetylase. | 0.684 |
SDN89353.1 | SDP89460.1 | SAMN05421507_101628 | SAMN05421507_11935 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.932 |
SDN89353.1 | alc | SAMN05421507_101628 | SAMN05421507_1011044 | N-carbamoyl-L-amino-acid hydrolase. | Allantoicase; Belongs to the allantoicase family. | 0.626 |
SDN89353.1 | argG | SAMN05421507_101628 | SAMN05421507_107157 | N-carbamoyl-L-amino-acid hydrolase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.537 |
SDN96096.1 | SDO35495.1 | SAMN05421507_101850 | SAMN05421507_102262 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | Aryl-phospho-beta-D-glucosidase BglC, GH1 family. | 0.595 |
SDN96096.1 | SDP34964.1 | SAMN05421507_101850 | SAMN05421507_107156 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | Polysaccharide deacetylase. | 0.519 |
SDO01189.1 | SDN89353.1 | SAMN05421507_1011042 | SAMN05421507_101628 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | N-carbamoyl-L-amino-acid hydrolase. | 0.568 |
SDO01189.1 | SDO01215.1 | SAMN05421507_1011042 | SAMN05421507_1011043 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Allantoinase. | 0.989 |
SDO01189.1 | SDP34964.1 | SAMN05421507_1011042 | SAMN05421507_107156 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Polysaccharide deacetylase. | 0.723 |
SDO01189.1 | SDP89460.1 | SAMN05421507_1011042 | SAMN05421507_11935 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Dihydropyrimidinase. | 0.892 |
SDO01189.1 | SDP95816.1 | SAMN05421507_1011042 | SAMN05421507_1269 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Allantoin racemase. | 0.831 |
SDO01189.1 | alc | SAMN05421507_1011042 | SAMN05421507_1011044 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Allantoicase; Belongs to the allantoicase family. | 0.974 |
SDO01215.1 | SDN89353.1 | SAMN05421507_1011043 | SAMN05421507_101628 | Allantoinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.949 |
SDO01215.1 | SDO01189.1 | SAMN05421507_1011043 | SAMN05421507_1011042 | Allantoinase. | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 0.989 |
SDO01215.1 | SDP34964.1 | SAMN05421507_1011043 | SAMN05421507_107156 | Allantoinase. | Polysaccharide deacetylase. | 0.708 |
SDO01215.1 | SDP89460.1 | SAMN05421507_1011043 | SAMN05421507_11935 | Allantoinase. | Dihydropyrimidinase. | 0.866 |
SDO01215.1 | SDP95816.1 | SAMN05421507_1011043 | SAMN05421507_1269 | Allantoinase. | Allantoin racemase. | 0.874 |
SDO01215.1 | alc | SAMN05421507_1011043 | SAMN05421507_1011044 | Allantoinase. | Allantoicase; Belongs to the allantoicase family. | 0.996 |
page 1 of 3