STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP34964.1Polysaccharide deacetylase. (280 aa)    
Predicted Functional Partners:
alc
Allantoicase; Belongs to the allantoicase family.
  
 
  0.727
SDO01189.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
  
 
  0.723
SDO01215.1
Allantoinase.
    
  0.708
SDP95816.1
Allantoin racemase.
    
  0.690
SDN89353.1
N-carbamoyl-L-amino-acid hydrolase.
    
  0.684
SDP89460.1
Dihydropyrimidinase.
    
  0.672
SDP34943.1
DNA-binding transcriptional regulator, MerR family.
 
     0.654
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
       0.615
SDO35495.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
 0.586
SDN96096.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.519
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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