STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP35391.1Two-component system, NarL family, response regulator DesR. (201 aa)    
Predicted Functional Partners:
SDP35411.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
  0.977
SDP94610.1
Signal transduction histidine kinase.
  
 0.954
SDN88588.1
GAF domain-containing protein.
  
 0.931
SDP68038.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
  0.890
SDP62770.1
Signal transduction histidine kinase.
 
  0.875
SDP97595.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.871
SDP35416.1
Hypothetical protein.
 
     0.828
SDP62408.1
Two-component system, NarL family, sensor histidine kinase DesK.
  
  0.821
SDP94968.1
Signal transduction histidine kinase.
  
  0.720
SDP76266.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.712
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.