Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO11043.1 | SDP40646.1 | SAMN05421507_1011383 | SAMN05421507_10851 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Amino acid adenylation domain-containing protein. | 0.988 |
SDO11043.1 | SDP41256.1 | SAMN05421507_1011383 | SAMN05421507_10877 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Protein of unknown function. | 0.843 |
SDO11043.1 | SDP41296.1 | SAMN05421507_1011383 | SAMN05421507_10879 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Signal transduction histidine kinase. | 0.418 |
SDO11043.1 | SDP95601.1 | SAMN05421507_1011383 | SAMN05421507_12591 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | AMP-binding enzyme C-terminal domain-containing protein. | 0.984 |
SDO11043.1 | SDP97241.1 | SAMN05421507_1011383 | SAMN05421507_13027 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.818 |
SDO11043.1 | SDP99076.1 | SAMN05421507_1011383 | SAMN05421507_1491 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.988 |
SDO86178.1 | SDP41256.1 | SAMN05421507_104199 | SAMN05421507_10877 | Hypothetical protein. | Protein of unknown function. | 0.908 |
SDO86178.1 | SDP41274.1 | SAMN05421507_104199 | SAMN05421507_10878 | Hypothetical protein. | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | 0.967 |
SDO86178.1 | SDP41296.1 | SAMN05421507_104199 | SAMN05421507_10879 | Hypothetical protein. | Signal transduction histidine kinase. | 0.789 |
SDP40646.1 | SDO11043.1 | SAMN05421507_10851 | SAMN05421507_1011383 | Amino acid adenylation domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.988 |
SDP40646.1 | SDP41256.1 | SAMN05421507_10851 | SAMN05421507_10877 | Amino acid adenylation domain-containing protein. | Protein of unknown function. | 0.922 |
SDP40646.1 | SDP41296.1 | SAMN05421507_10851 | SAMN05421507_10879 | Amino acid adenylation domain-containing protein. | Signal transduction histidine kinase. | 0.452 |
SDP40646.1 | SDP95601.1 | SAMN05421507_10851 | SAMN05421507_12591 | Amino acid adenylation domain-containing protein. | AMP-binding enzyme C-terminal domain-containing protein. | 0.999 |
SDP40646.1 | SDP97241.1 | SAMN05421507_10851 | SAMN05421507_13027 | Amino acid adenylation domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.988 |
SDP40646.1 | SDP99076.1 | SAMN05421507_10851 | SAMN05421507_1491 | Amino acid adenylation domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDP41231.1 | SDP41256.1 | SAMN05421507_10876 | SAMN05421507_10877 | Signal recognition particle receptor subunit beta, a GTPase. | Protein of unknown function. | 0.946 |
SDP41231.1 | SDP41274.1 | SAMN05421507_10876 | SAMN05421507_10878 | Signal recognition particle receptor subunit beta, a GTPase. | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | 0.992 |
SDP41231.1 | SDP41296.1 | SAMN05421507_10876 | SAMN05421507_10879 | Signal recognition particle receptor subunit beta, a GTPase. | Signal transduction histidine kinase. | 0.929 |
SDP41256.1 | SDO11043.1 | SAMN05421507_10877 | SAMN05421507_1011383 | Protein of unknown function. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.843 |
SDP41256.1 | SDO86178.1 | SAMN05421507_10877 | SAMN05421507_104199 | Protein of unknown function. | Hypothetical protein. | 0.908 |
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