STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP41256.1Protein of unknown function. (126 aa)    
Predicted Functional Partners:
SDP41274.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
   
 0.949
SDP41231.1
Signal recognition particle receptor subunit beta, a GTPase.
 
  
 0.946
SDP41296.1
Signal transduction histidine kinase.
 
 
 0.943
SDP40646.1
Amino acid adenylation domain-containing protein.
  
 
 0.922
SDP99076.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.922
SDO86178.1
Hypothetical protein.
 
  
 0.908
SDP71301.1
Hypothetical protein.
 
  
 0.908
SDO11043.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.843
SDP97241.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.843
SDP95601.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 
 0.835
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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