STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP57050.1Transglutaminase-like superfamily protein. (141 aa)    
Predicted Functional Partners:
SDP57070.1
Asparagine synthase (glutamine-hydrolysing).
 
     0.953
SDP57031.1
Coenzyme PQQ synthesis protein D (PqqD).
 
     0.941
SDP57090.1
Hypothetical protein.
       0.768
SDP40145.1
Asparagine synthase (glutamine-hydrolysing).
 
     0.732
SDP56969.1
Kef-type K+ transport system, membrane component KefB.
       0.709
SDP56989.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.709
SDP57011.1
Tryptophan halogenase.
       0.709
SDP98480.1
Death domain-containing protein.
  
     0.541
SDP57110.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.509
SDP98479.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.