Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN79234.1 | SDN94443.1 | SAMN05421507_101295 | SAMN05421507_101795 | Hypothetical protein. | Hypothetical protein. | 0.706 |
SDN79234.1 | SDP04548.1 | SAMN05421507_101295 | SAMN05421507_10564 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SDN79234.1 | SDP21051.1 | SAMN05421507_101295 | SAMN05421507_10626 | Hypothetical protein. | PPE family protein. | 0.730 |
SDN79234.1 | SDP23757.1 | SAMN05421507_101295 | SAMN05421507_106131 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.729 |
SDN79234.1 | SDP54188.1 | SAMN05421507_101295 | SAMN05421507_11053 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.683 |
SDN79234.1 | SDP54223.1 | SAMN05421507_101295 | SAMN05421507_11055 | Hypothetical protein. | Hypothetical protein. | 0.601 |
SDN79234.1 | SDP89639.1 | SAMN05421507_101295 | SAMN05421507_11956 | Hypothetical protein. | Hypothetical protein. | 0.732 |
SDN94443.1 | SDN79234.1 | SAMN05421507_101795 | SAMN05421507_101295 | Hypothetical protein. | Hypothetical protein. | 0.706 |
SDN94443.1 | SDP21051.1 | SAMN05421507_101795 | SAMN05421507_10626 | Hypothetical protein. | PPE family protein. | 0.517 |
SDN94443.1 | SDP23757.1 | SAMN05421507_101795 | SAMN05421507_106131 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.584 |
SDN94443.1 | SDP54188.1 | SAMN05421507_101795 | SAMN05421507_11053 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.719 |
SDN94443.1 | SDP54223.1 | SAMN05421507_101795 | SAMN05421507_11055 | Hypothetical protein. | Hypothetical protein. | 0.407 |
SDN94443.1 | SDP89639.1 | SAMN05421507_101795 | SAMN05421507_11956 | Hypothetical protein. | Hypothetical protein. | 0.567 |
SDN98874.1 | SDP54188.1 | SAMN05421507_101951 | SAMN05421507_11053 | CHAT domain-containing protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.630 |
SDP04548.1 | SDN79234.1 | SAMN05421507_10564 | SAMN05421507_101295 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SDP04548.1 | SDP21051.1 | SAMN05421507_10564 | SAMN05421507_10626 | Hypothetical protein. | PPE family protein. | 0.724 |
SDP04548.1 | SDP54188.1 | SAMN05421507_10564 | SAMN05421507_11053 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.737 |
SDP04548.1 | SDP54223.1 | SAMN05421507_10564 | SAMN05421507_11055 | Hypothetical protein. | Hypothetical protein. | 0.764 |
SDP04548.1 | SDP89639.1 | SAMN05421507_10564 | SAMN05421507_11956 | Hypothetical protein. | Hypothetical protein. | 0.645 |
SDP21051.1 | SDN79234.1 | SAMN05421507_10626 | SAMN05421507_101295 | PPE family protein. | Hypothetical protein. | 0.730 |
page 1 of 3