STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP54334.1Helix-turn-helix domain-containing protein. (185 aa)    
Predicted Functional Partners:
SDP54315.1
Hypothetical protein.
       0.705
SDP73179.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.660
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.645
SDN75741.1
NADH-quinone oxidoreductase subunit I.
    
   0.645
SDP54352.1
Hypothetical protein.
       0.578
SDO31989.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.565
SDP25691.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.565
SDP60247.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.565
SDP83177.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.565
SDP54367.1
Phytoene dehydrogenase-related protein.
 
     0.553
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.