STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP55061.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SDP76144.1
Septum formation.
  
     0.738
SDP77248.1
RecB family nuclease, putative, TM0106 family.
  
     0.699
SDP66927.1
Protein of unknown function.
  
     0.698
SDP54242.1
Protein of unknown function.
  
     0.658
SDN83487.1
Hypothetical protein.
  
     0.656
SDP78259.1
SdpI/YhfL protein family protein.
  
     0.636
SDN74442.1
Protein of unknown function.
  
     0.634
SDN80415.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
  
     0.632
SDP55399.1
Hypothetical protein.
  
     0.629
SDP47205.1
Hypothetical protein.
  
     0.627
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.