STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP62509.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
SDP62527.1
TAP-like protein.
  
    0.719
SDP62542.1
Hypothetical protein.
       0.718
SDP72147.1
NADPH2:quinone reductase.
 
    0.643
SDP41448.1
NADPH:quinone reductase.
 
    0.598
SDP27981.1
NADPH:quinone reductase.
 
    0.592
SDP43334.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
    0.590
SDP77480.1
Hypothetical protein.
 
    0.575
SDP62493.1
Actinorhodin biosynthesis protein ActVIA/bifunctional aromatase (cyclase/dehydratase).
       0.543
SDP71938.1
NADPH2:quinone reductase.
 
    0.530
SDO50015.1
NADPH:quinone reductase.
 
    0.527
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.