STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP59910.16-O-methylguanine DNA methyltransferase, DNA binding domain. (845 aa)    
Predicted Functional Partners:
SDP59892.1
Hypothetical protein.
       0.773
SDP93448.1
Hypothetical protein.
  
     0.722
SDP88334.1
Hypothetical protein.
  
     0.671
SDP88353.1
Hypothetical protein.
  
     0.644
SDP33526.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
   0.576
SDO62600.1
Hypothetical protein.
 
     0.564
SDO10043.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.551
SDP04355.1
Subtilase family protein.
  
     0.532
SDP80278.1
Von Willebrand factor type A domain-containing protein.
  
     0.531
SDP98774.1
DNA polymerase-3 subunit epsilon.
   
 
 0.525
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.